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ASPRAlign
ASPRAlign is a command line tool for Algebraic Structural Pseudoknot RNA Alignment.
ASPRAlign
ASPRAlign is a command line tool for Algebraic Structural Pseudoknot RNA Alignment.
- Quadrini, M., Tesei, L. & Merelli, E. An algebraic language for RNA pseudoknots comparison. BMC Bioinformatics 20 (Suppl 4), 161 (2019). https://doi.org/10.1186/s12859-019-2689-5
- Michela Quadrini, Luca Tesei, Emanuela Merelli, ASPRAlign: a tool for the alignment of RNA secondary structures with arbitrary pseudoknots, Bioinformatics, Volume 36, Issue 11, June 2020, Pages 3578–3579, https://doi.org/10.1093/bioinformatics/btaa147
- Download the last version of ASPRAlign
jHoles
jHoles is a tool for topological data analysis.
DISPAS 2.0
Dispas 2.0 is an agent-based simulator for fish stock evaluation. It has been implemented focusing on the stock of common sole of the Noerthern and Central Adriatic See.